Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TUBP50607 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.64■□□□□ 0.26
TUBP50607 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TUBP50607 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBP50607 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBP50607 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBP50607 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 AZGP1P1-201ENST00000411909 902 ntBASIC16.64■□□□□ 0.25
TUBP50607 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 AC055876.2-201ENST00000531834 546 ntBASIC16.64■□□□□ 0.25
TUBP50607 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
TUBP50607 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBP50607 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBP50607 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBP50607 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBP50607 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBP50607 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBP50607 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TUBP50607 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.63■□□□□ 0.25
TUBP50607 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.63■□□□□ 0.25
TUBP50607 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.63■□□□□ 0.25
TUBP50607 GNAQP1-201ENST00000444815 1067 ntBASIC16.63■□□□□ 0.25
TUBP50607 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.63■□□□□ 0.25
TUBP50607 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.63■□□□□ 0.25
TUBP50607 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 AL365203.3-201ENST00000609742 2057 ntBASIC16.63■□□□□ 0.25
TUBP50607 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBP50607 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 SLC7A15P-201ENST00000424028 1363 ntBASIC16.63■□□□□ 0.25
TUBP50607 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBP50607 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBP50607 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TUBP50607 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms