Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
USP8P40818 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
USP8P40818 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.28■□□□□ 0.36
USP8P40818 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.28■□□□□ 0.36
USP8P40818 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.28■□□□□ 0.36
USP8P40818 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.28■□□□□ 0.36
USP8P40818 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.28■□□□□ 0.36
USP8P40818 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.28■□□□□ 0.36
USP8P40818 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.28■□□□□ 0.36
USP8P40818 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.28■□□□□ 0.36
USP8P40818 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
USP8P40818 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.28■□□□□ 0.36
USP8P40818 AP001282.1-201ENST00000531301 1499 ntBASIC17.28■□□□□ 0.36
USP8P40818 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
USP8P40818 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.28■□□□□ 0.36
USP8P40818 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP8P40818 AC104581.4-201ENST00000623126 3052 ntBASIC17.27■□□□□ 0.36
USP8P40818 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 FAM220BP-201ENST00000377689 816 ntBASIC17.27■□□□□ 0.36
USP8P40818 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 RPSAP43-201ENST00000402237 625 ntBASIC17.27■□□□□ 0.36
USP8P40818 AC004461.1-201ENST00000412461 403 ntBASIC17.27■□□□□ 0.36
USP8P40818 UPF3AP3-201ENST00000420996 769 ntBASIC17.27■□□□□ 0.36
USP8P40818 KRT18P32-201ENST00000424695 1287 ntBASIC17.27■□□□□ 0.36
USP8P40818 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.27■□□□□ 0.36
USP8P40818 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.27■□□□□ 0.36
USP8P40818 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.27■□□□□ 0.36
USP8P40818 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.27■□□□□ 0.36
USP8P40818 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.27■□□□□ 0.36
USP8P40818 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.27■□□□□ 0.36
USP8P40818 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.27■□□□□ 0.36
USP8P40818 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP8P40818 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
USP8P40818 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
USP8P40818 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 AP3S2-216ENST00000617003 1561 ntBASIC17.27■□□□□ 0.35
USP8P40818 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
USP8P40818 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.27■□□□□ 0.35
USP8P40818 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP8P40818 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
USP8P40818 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP8P40818 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.26■□□□□ 0.35
USP8P40818 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP8P40818 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms