Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.65■□□□□ 0.42
CIITAP33076 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CIITAP33076 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CIITAP33076 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CIITAP33076 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CIITAP33076 AC092850.2-201ENST00000623821 2697 ntBASIC17.65■□□□□ 0.42
CIITAP33076 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.64■□□□□ 0.42
CIITAP33076 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CIITAP33076 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CIITAP33076 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CIITAP33076 CU639417.3-201ENST00000624240 1404 ntBASIC17.64■□□□□ 0.42
CIITAP33076 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.64■□□□□ 0.42
CIITAP33076 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CIITAP33076 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 AP006294.1-201ENST00000415407 339 ntBASIC17.64■□□□□ 0.41
CIITAP33076 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.64■□□□□ 0.41
CIITAP33076 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 VDAC1P7-201ENST00000462417 847 ntBASIC17.64■□□□□ 0.41
CIITAP33076 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.64■□□□□ 0.41
CIITAP33076 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.64■□□□□ 0.41
CIITAP33076 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.64■□□□□ 0.41
CIITAP33076 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.64■□□□□ 0.41
CIITAP33076 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CIITAP33076 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.64■□□□□ 0.41
CIITAP33076 AC025181.2-201ENST00000606994 802 ntBASIC17.64■□□□□ 0.41
CIITAP33076 AC012645.4-201ENST00000610691 1061 ntBASIC17.64■□□□□ 0.41
CIITAP33076 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.64■□□□□ 0.41
CIITAP33076 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.64■□□□□ 0.41
CIITAP33076 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.64■□□□□ 0.41
CIITAP33076 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.64■□□□□ 0.41
CIITAP33076 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 INTS4P2-202ENST00000614726 2019 ntBASIC17.64■□□□□ 0.41
CIITAP33076 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CIITAP33076 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CIITAP33076 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.64■□□□□ 0.41
CIITAP33076 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 AC134915.1-201ENST00000426461 574 ntBASIC17.63■□□□□ 0.41
CIITAP33076 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CIITAP33076 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.63■□□□□ 0.41
CIITAP33076 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.63■□□□□ 0.41
CIITAP33076 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.63■□□□□ 0.41
CIITAP33076 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.63■□□□□ 0.41
CIITAP33076 AL359711.2-201ENST00000563105 872 ntBASIC17.63■□□□□ 0.41
CIITAP33076 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.63■□□□□ 0.41
CIITAP33076 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.63■□□□□ 0.41
CIITAP33076 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CIITAP33076 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.63■□□□□ 0.41
CIITAP33076 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CIITAP33076 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CIITAP33076 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms