Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD40P25942 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CD40P25942 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD40P25942 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 PCDHB19P-201ENST00000570871 2371 ntBASIC13.56□□□□□ -0.24
CD40P25942 AC112504.1-201ENST00000623415 1841 ntBASIC13.56□□□□□ -0.24
CD40P25942 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 OR8S1-201ENST00000310194 1080 ntBASIC13.56□□□□□ -0.24
CD40P25942 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.56□□□□□ -0.24
CD40P25942 AC134915.1-201ENST00000426461 574 ntBASIC13.56□□□□□ -0.24
CD40P25942 U91328.1-201ENST00000437528 223 ntBASIC13.56□□□□□ -0.24
CD40P25942 AC007389.4-201ENST00000454674 793 ntBASIC13.56□□□□□ -0.24
CD40P25942 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.56□□□□□ -0.24
CD40P25942 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.56□□□□□ -0.24
CD40P25942 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
CD40P25942 AC000095.1-201ENST00000603208 874 ntBASIC13.56□□□□□ -0.24
CD40P25942 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.56□□□□□ -0.24
CD40P25942 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40P25942 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD40P25942 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40P25942 KRT8P22-201ENST00000562317 1415 ntBASIC13.56□□□□□ -0.24
CD40P25942 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 AL603832.2-201ENST00000566195 2125 ntBASIC13.55□□□□□ -0.24
CD40P25942 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 AL133267.1-201ENST00000398220 340 ntBASIC13.55□□□□□ -0.24
CD40P25942 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40P25942 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.55□□□□□ -0.24
CD40P25942 AL162726.2-201ENST00000438986 1017 ntBASIC13.55□□□□□ -0.24
CD40P25942 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 GPR53P-205ENST00000457298 1084 ntBASIC13.55□□□□□ -0.24
CD40P25942 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.55□□□□□ -0.24
CD40P25942 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.55□□□□□ -0.24
CD40P25942 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40P25942 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.55□□□□□ -0.24
CD40P25942 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40P25942 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.55□□□□□ -0.24
CD40P25942 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.55□□□□□ -0.24
CD40P25942 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms