Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL1P22362 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL1P22362 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 AC026150.2-201ENST00000564693 1156 ntBASIC13.56□□□□□ -0.24
CCL1P22362 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL1P22362 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 AC003101.2-201ENST00000612557 442 ntBASIC13.56□□□□□ -0.24
CCL1P22362 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL1P22362 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.56□□□□□ -0.24
CCL1P22362 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL1P22362 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL1P22362 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL1P22362 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 CICP23-201ENST00000605013 2741 ntBASIC13.55□□□□□ -0.24
CCL1P22362 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.55□□□□□ -0.24
CCL1P22362 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.55□□□□□ -0.24
CCL1P22362 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL1P22362 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL1P22362 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 AC004835.2-201ENST00000603762 682 ntBASIC13.55□□□□□ -0.24
CCL1P22362 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CCL1P22362 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CCL1P22362 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL1P22362 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 LINC00528-201ENST00000600723 2160 ntBASIC13.54□□□□□ -0.24
CCL1P22362 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms