Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 LINC02447-202ENST00000501888 2146 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB4AP20338 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB4AP20338 AL138831.2-201ENST00000606564 490 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
RAB4AP20338 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB4AP20338 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.17□□□□□ -0.46
RAB4AP20338 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RAB4AP20338 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.17□□□□□ -0.46
RAB4AP20338 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 AC020658.6-201ENST00000623564 1870 ntBASIC12.17□□□□□ -0.46
RAB4AP20338 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.17□□□□□ -0.46
RAB4AP20338 AL359075.1-203ENST00000462729 1002 ntBASIC12.17□□□□□ -0.46
RAB4AP20338 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.17□□□□□ -0.46
RAB4AP20338 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
RAB4AP20338 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.17□□□□□ -0.46
RAB4AP20338 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.17□□□□□ -0.46
RAB4AP20338 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 AC013726.1-201ENST00000563747 2285 ntBASIC12.17□□□□□ -0.46
RAB4AP20338 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB4AP20338 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB4AP20338 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB4AP20338 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB4AP20338 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB4AP20338 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms