Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.26■□□□□ 0.03
SP9P0CG40 AC090164.2-201ENST00000611487 516 ntBASIC15.26■□□□□ 0.03
SP9P0CG40 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.26■□□□□ 0.03
SP9P0CG40 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
SP9P0CG40 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
SP9P0CG40 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SP9P0CG40 AC005915.1-201ENST00000624912 2018 ntBASIC15.26■□□□□ 0.03
SP9P0CG40 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SP9P0CG40 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SP9P0CG40 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.25■□□□□ 0.03
SP9P0CG40 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
SP9P0CG40 UBALD1-205ENST00000590891 2641 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 RN7SKP214-201ENST00000364208 315 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 EIF3FP3-201ENST00000434851 1086 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 AC090857.1-201ENST00000527400 390 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.25■□□□□ 0.03
SP9P0CG40 AC005324.6-201ENST00000587972 613 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 AC005357.2-202ENST00000590507 1060 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 AC025271.4-201ENST00000621477 1726 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.25■□□□□ 0.03
SP9P0CG40 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 OR6D1P-202ENST00000641007 5290 ntBASIC15.25■□□□□ 0.03
SP9P0CG40 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.25■□□□□ 0.03
SP9P0CG40 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SP9P0CG40 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SP9P0CG40 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SP9P0CG40 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SP9P0CG40 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.24■□□□□ 0.03
SP9P0CG40 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.24■□□□□ 0.03
SP9P0CG40 AC097065.1-201ENST00000425737 517 ntBASIC15.24■□□□□ 0.03
SP9P0CG40 GHSR-202ENST00000427970 912 ntBASIC15.24■□□□□ 0.03
SP9P0CG40 RPL7P35-201ENST00000446943 740 ntBASIC15.24■□□□□ 0.03
SP9P0CG40 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.24■□□□□ 0.03
SP9P0CG40 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.24■□□□□ 0.03
SP9P0CG40 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SP9P0CG40 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.24■□□□□ 0.03
SP9P0CG40 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.24■□□□□ 0.03
SP9P0CG40 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.24■□□□□ 0.03
SP9P0CG40 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SP9P0CG40 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SP9P0CG40 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP9P0CG40 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms