Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 AC002347.1-201ENST00000569543 541 ntBASIC16.95■□□□□ 0.3
TUBB4AP04350 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBB4AP04350 AC011467.4-201ENST00000594891 528 ntBASIC16.95■□□□□ 0.3
TUBB4AP04350 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.95■□□□□ 0.3
TUBB4AP04350 AC093458.2-201ENST00000623150 629 ntBASIC16.95■□□□□ 0.3
TUBB4AP04350 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TUBB4AP04350 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TUBB4AP04350 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 AC104819.1-201ENST00000504587 486 ntBASIC16.94■□□□□ 0.3
TUBB4AP04350 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TUBB4AP04350 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TUBB4AP04350 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TUBB4AP04350 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.93■□□□□ 0.3
TUBB4AP04350 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.93■□□□□ 0.3
TUBB4AP04350 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TUBB4AP04350 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.93■□□□□ 0.3
TUBB4AP04350 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.93■□□□□ 0.3
TUBB4AP04350 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TUBB4AP04350 KRT16P4-201ENST00000453883 522 ntBASIC16.93■□□□□ 0.3
TUBB4AP04350 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TUBB4AP04350 KRT18P34-201ENST00000488218 1270 ntBASIC16.93■□□□□ 0.3
TUBB4AP04350 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.93■□□□□ 0.3
TUBB4AP04350 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.93■□□□□ 0.3
TUBB4AP04350 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
TUBB4AP04350 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TUBB4AP04350 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms