Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.75■□□□□ 0.11
PHGDHO43175 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PHGDHO43175 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PHGDHO43175 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHGDHO43175 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.75■□□□□ 0.11
PHGDHO43175 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PHGDHO43175 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.74■□□□□ 0.11
PHGDHO43175 MIR574-201ENST00000385209 96 ntBASIC15.74■□□□□ 0.11
PHGDHO43175 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 AC004832.2-201ENST00000426397 482 ntBASIC15.74■□□□□ 0.11
PHGDHO43175 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 PHKG1P2-201ENST00000457537 863 ntBASIC15.74■□□□□ 0.11
PHGDHO43175 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.74■□□□□ 0.11
PHGDHO43175 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 KRT18P58-201ENST00000527480 1120 ntBASIC15.74■□□□□ 0.11
PHGDHO43175 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.74■□□□□ 0.11
PHGDHO43175 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PHGDHO43175 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PHGDHO43175 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.74■□□□□ 0.11
PHGDHO43175 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.74■□□□□ 0.11
PHGDHO43175 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
PHGDHO43175 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHGDHO43175 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PHGDHO43175 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.73■□□□□ 0.11
PHGDHO43175 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PHGDHO43175 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.73■□□□□ 0.11
PHGDHO43175 HTR5BP-201ENST00000430851 1154 ntBASIC15.73■□□□□ 0.11
PHGDHO43175 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 ACTG1P14-201ENST00000446382 1122 ntBASIC15.73■□□□□ 0.11
PHGDHO43175 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.73■□□□□ 0.11
PHGDHO43175 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.73■□□□□ 0.11
PHGDHO43175 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.73■□□□□ 0.11
PHGDHO43175 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.73■□□□□ 0.11
PHGDHO43175 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHGDHO43175 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PHGDHO43175 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms