Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 INE1-201ENST00000456273 945 ntBASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 TPRX2P-201ENST00000535362 881 ntBASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 GPAA1P2-202ENST00000606848 1787 ntBASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.54■□□□□ 0.08
TMX2-CTNND1H3BSU7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC023908.3-201ENST00000564211 3047 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC007274.1-201ENST00000439805 662 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 RRP7BP-205ENST00000566851 833 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC008494.3-201ENST00000606615 944 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL365330.1-201ENST00000607459 531 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.53■□□□□ 0.08
TMX2-CTNND1H3BSU7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMX2-CTNND1H3BSU7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms