Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 AC136604.1-201ENST00000418535 575 ntBASIC16.77■□□□□ 0.28
RCCD1A6NED2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 AL139010.1-201ENST00000454878 894 ntBASIC16.77■□□□□ 0.28
RCCD1A6NED2 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.77■□□□□ 0.28
RCCD1A6NED2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RCCD1A6NED2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.77■□□□□ 0.28
RCCD1A6NED2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.77■□□□□ 0.27
RCCD1A6NED2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCCD1A6NED2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.77■□□□□ 0.27
RCCD1A6NED2 ACE3P-201ENST00000423435 1973 ntBASIC16.77■□□□□ 0.27
RCCD1A6NED2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
RCCD1A6NED2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.77■□□□□ 0.27
RCCD1A6NED2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RCCD1A6NED2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.76■□□□□ 0.27
RCCD1A6NED2 MTND4LP12-201ENST00000448237 295 ntBASIC16.76■□□□□ 0.27
RCCD1A6NED2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 KRT8P48-201ENST00000515599 1220 ntBASIC16.76■□□□□ 0.27
RCCD1A6NED2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.76■□□□□ 0.27
RCCD1A6NED2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCCD1A6NED2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.75■□□□□ 0.27
RCCD1A6NED2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCCD1A6NED2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms