Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 AC135586.1-201ENST00000539323 574 ntBASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 AL035252.4-201ENST00000624174 288 ntBASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 TMBIM7P-203ENST00000641617 1718 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC087481.3-201ENST00000602886 1894 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 SERBP1P3-201ENST00000459980 809 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AP005018.1-201ENST00000525475 301 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 HNRNPUP1-201ENST00000554987 333 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC005225.4-201ENST00000557330 545 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC010336.2-201ENST00000564226 506 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AL662799.1-202ENST00000614205 422 ntBASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPDC1A2A3K4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 AZGP1P1-201ENST00000411909 902 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 PHKG1P2-201ENST00000457537 863 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 AC044860.1-202ENST00000559481 777 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 AC027307.3-201ENST00000594262 1100 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPDC1A2A3K4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms