Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV3S1A0A5B6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV3S1A0A5B6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 AC008735.5-201ENST00000623544 497 ntBASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 PKD1P5-201ENST00000532415 10291 ntBASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV3S1A0A5B6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC068587.6-202ENST00000641839 5619 ntBASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC092135.3-201ENST00000624151 1846 ntBASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC011467.4-201ENST00000594891 528 ntBASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 AC005252.3-201ENST00000623855 2258 ntBASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV3S1A0A5B6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV3S1A0A5B6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms