Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 FAM86HP-204ENST00000513466 959 ntBASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC015910.1-201ENST00000579400 975 ntBASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AL118558.3-201ENST00000607414 1079 ntBASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AGGF1P2-201ENST00000426656 2106 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 FLJ38576-201ENST00000623820 2459 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 MIR326-201ENST00000362220 95 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 Z93015.1-201ENST00000451718 390 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AL022328.3-201ENST00000607943 679 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 AP005019.2-201ENST00000615104 511 ntBASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC187A0A096LP49 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ME2P1-201ENST00000426028 1970 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AC006001.1-201ENST00000325130 474 ntBASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC187A0A096LP49 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms