Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AC015819.3-201ENST00000624305 2674 ntBASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CKBP1-201ENST00000565489 1086 ntBASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 UBE2DNL-204ENST00000602536 740 ntBASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 BID-214ENST00000617586 542 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 FES-203ENST00000394302 2133 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LINC01558Q9Y6Z2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LINC01558Q9Y6Z2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC8.09□□□□□ -1.12
LINC01558Q9Y6Z2 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 FAM90A12P-201ENST00000519497 2375 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 FAM90A24P-201ENST00000520792 2369 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms