Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 CICP6-201ENST00000457191 2729 ntBASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 PCDH8P1-201ENST00000428983 2773 ntBASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZC3H4Q9UPT8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 AC098935.1-201ENST00000446057 611 ntBASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 RN7SL736P-201ENST00000613111 269 ntBASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZC3H4Q9UPT8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AC005740.2-201ENST00000511085 419 ntBASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 NPM1P43-201ENST00000558669 786 ntBASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AL450472.2-201ENST00000603663 1156 ntBASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZC3H4Q9UPT8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms