Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 OR10B1P-201ENST00000601666 907 ntBASIC19.83■□□□□ 0.77
SCN11AQ9UI33 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 AC138028.6-201ENST00000616106 1482 ntBASIC19.83■□□□□ 0.77
SCN11AQ9UI33 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 COX5BP1-201ENST00000507622 393 ntBASIC19.83■□□□□ 0.76
SCN11AQ9UI33 AC044849.1-201ENST00000519737 1188 ntBASIC19.83■□□□□ 0.76
SCN11AQ9UI33 AC013355.1-201ENST00000562625 723 ntBASIC19.83■□□□□ 0.76
SCN11AQ9UI33 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN11AQ9UI33 AC092127.1-201ENST00000567093 3455 ntBASIC19.82■□□□□ 0.76
SCN11AQ9UI33 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 PCDHB19P-201ENST00000570871 2371 ntBASIC19.82■□□□□ 0.76
SCN11AQ9UI33 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN11AQ9UI33 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TNRC18P3-201ENST00000441896 2691 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AC100850.1-201ENST00000506768 649 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AL451050.2-201ENST00000606967 682 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AC138466.3-201ENST00000619983 221 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AP001002.3-201ENST00000623482 206 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 AC105250.1-201ENST00000509378 2057 ntBASIC19.81■□□□□ 0.76
SCN11AQ9UI33 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN11AQ9UI33 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.8■□□□□ 0.76
SCN11AQ9UI33 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 TPM3P8-201ENST00000330554 643 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms