Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC074338.1-201ENST00000416825 156 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC009477.1-201ENST00000452936 217 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 RN7SL618P-201ENST00000477850 296 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC004890.2-204ENST00000481968 304 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC009407.1-201ENST00000568958 598 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.98□□□□□ -0.01
KCMF1Q9P0J7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AL512638.1-201ENST00000457493 794 ntBASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCMF1Q9P0J7 CICP13-201ENST00000422015 2789 ntBASIC14.96□□□□□ -0.01
KCMF1Q9P0J7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KCMF1Q9P0J7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.96□□□□□ -0.01
KCMF1Q9P0J7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms