Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AC097376.2-205ENST00000610159 5334 ntBASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 TREML5P-201ENST00000421694 576 ntBASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AC241585.1-201ENST00000433527 519 ntBASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 AL138828.2-201ENST00000615812 383 ntBASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PARPBPQ9NWS1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.21□□□□□ -0.14
PARPBPQ9NWS1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 SBF1P1-201ENST00000444527 5631 ntBASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 AC134407.2-201ENST00000625089 1978 ntBASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PARPBPQ9NWS1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 AC087499.5-201ENST00000452760 1342 ntBASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 AC069224.1-201ENST00000566372 1715 ntBASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 RPL37AP1-201ENST00000412502 279 ntBASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 EEF1DP4-201ENST00000446006 880 ntBASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 SPDYE12P-201ENST00000618416 771 ntBASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.19□□□□□ -0.14
PARPBPQ9NWS1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms