Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 AL049840.4-201ENST00000602422 811 ntBASIC17.08■□□□□ 0.32
PGBD4Q96DM1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD4Q96DM1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD4Q96DM1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AC046158.3-201ENST00000624947 2558 ntBASIC17.06■□□□□ 0.32
PGBD4Q96DM1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AC233724.13-201ENST00000598383 410 ntBASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AC000095.1-201ENST00000603208 874 ntBASIC17.06■□□□□ 0.32
PGBD4Q96DM1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 NFIC-211ENST00000641145 8399 ntBASIC17.06■□□□□ 0.32
PGBD4Q96DM1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD4Q96DM1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms