Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.6□□□□□ -0.07
HPS1Q92902 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HPS1Q92902 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HPS1Q92902 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HPS1Q92902 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.6□□□□□ -0.07
HPS1Q92902 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 YBX2P1-201ENST00000394192 760 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 LINC00982-205ENST00000420957 435 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 GPX1P2-201ENST00000429271 606 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HPS1Q92902 AC108751.1-201ENST00000490852 363 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.59□□□□□ -0.07
HPS1Q92902 ADAM3B-201ENST00000569937 840 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 MTDHP5-201ENST00000598980 586 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.59□□□□□ -0.07
HPS1Q92902 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HPS1Q92902 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.59□□□□□ -0.07
HPS1Q92902 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HPS1Q92902 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.58□□□□□ -0.07
HPS1Q92902 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.58□□□□□ -0.07
HPS1Q92902 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HPS1Q92902 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HPS1Q92902 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.58□□□□□ -0.07
HPS1Q92902 COL6A4P2-202ENST00000504443 2753 ntBASIC14.58□□□□□ -0.07
HPS1Q92902 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.58□□□□□ -0.07
HPS1Q92902 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HPS1Q92902 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HPS1Q92902 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HPS1Q92902 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 AL645728.1-201ENST00000366221 2101 ntBASIC14.58□□□□□ -0.08
HPS1Q92902 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HPS1Q92902 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 RPSAP43-201ENST00000402237 625 ntBASIC14.58□□□□□ -0.08
HPS1Q92902 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.58□□□□□ -0.08
HPS1Q92902 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.58□□□□□ -0.08
HPS1Q92902 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms