Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNED1Q8TER0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNED1Q8TER0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC092978.1-202ENST00000637590 1327 ntBASIC18.86■□□□□ 0.61
SNED1Q8TER0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC253536.4-201ENST00000440539 267 ntBASIC18.86■□□□□ 0.61
SNED1Q8TER0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 CHMP1AP1-201ENST00000445563 662 ntBASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC106820.3-201ENST00000561653 397 ntBASIC18.86■□□□□ 0.61
SNED1Q8TER0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 AC007663.3-201ENST00000609632 465 ntBASIC18.86■□□□□ 0.61
SNED1Q8TER0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SNED1Q8TER0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNED1Q8TER0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 HIST2H2BB-201ENST00000449108 381 ntBASIC18.85■□□□□ 0.61
SNED1Q8TER0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNED1Q8TER0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 TUBBP5-203ENST00000508529 1334 ntBASIC18.85■□□□□ 0.61
SNED1Q8TER0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNED1Q8TER0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 AC245884.6-201ENST00000515672 1067 ntBASIC18.84■□□□□ 0.61
SNED1Q8TER0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.84■□□□□ 0.61
SNED1Q8TER0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNED1Q8TER0 MIR5572-201ENST00000583188 137 ntBASIC18.84■□□□□ 0.61
SNED1Q8TER0 U62317.3-201ENST00000608319 855 ntBASIC18.84■□□□□ 0.61
SNED1Q8TER0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms