Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.52□□□□□ -0.4
TTC9CQ8N5M4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AP003680.1-201ENST00000598970 3660 ntBASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AC069262.1-201ENST00000539058 672 ntBASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 LINC00628-201ENST00000628516 1289 ntBASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 AC097376.2-205ENST00000610159 5334 ntBASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TTC9CQ8N5M4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 AC022532.1-201ENST00000624563 1728 ntBASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 AC027612.4-201ENST00000605371 583 ntBASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 KRT8P12-202ENST00000472924 1397 ntBASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TTC9CQ8N5M4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms