Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AC010491.1-201ENST00000563101 2797 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 FAM86LP-201ENST00000478302 853 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AC132938.2-201ENST00000579188 680 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 MIR4313-201ENST00000580760 101 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 TMEM261P1-201ENST00000604899 340 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AL391069.4-201ENST00000609583 481 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 WFDC1-204ENST00000613603 549 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 AL591163.1-201ENST00000641757 987 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AL512384.1-201ENST00000406683 331 ntBASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC092552.1-201ENST00000547243 906 ntBASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 IGHV3-72-202ENST00000621503 303 ntBASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SCN4BQ8IWT1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms