Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL138799.1-201ENST00000448213 1675 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 KRTAP19-9P-201ENST00000421795 191 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC005357.2-202ENST00000590507 1060 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AL023775.1-201ENST00000454907 1746 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC024909.3-201ENST00000611513 2257 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 RN7SL8P-201ENST00000461771 266 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 MIR3147-201ENST00000577811 66 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 MIR4783-201ENST00000580343 82 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 PCBP2-OT1-201ENST00000634357 590 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 PDIA3P2-201ENST00000428073 158 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AP001582.1-201ENST00000525856 295 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AC132192.2-201ENST00000596206 1147 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AL391280.1-201ENST00000506969 1062 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AL161670.2-201ENST00000557650 1227 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 RNU1-114P-201ENST00000365297 166 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AC012362.1-201ENST00000434906 739 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 DNM1P30-201ENST00000563586 452 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AP005019.2-201ENST00000615104 511 ntBASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13BQ7Z7G8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 AL133267.1-201ENST00000398220 340 ntBASIC9.5□□□□□ -0.89
VPS13BQ7Z7G8 MIR1227-201ENST00000408484 88 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms