Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 KRT18P25-201ENST00000508931 1278 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 MIR4750-201ENST00000584564 56 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 MIR3147-201ENST00000577811 66 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 AP001282.1-201ENST00000531301 1499 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 PDIA3P2-201ENST00000428073 158 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 AC132872.4-202ENST00000622924 2756 ntBASIC12.86□□□□□ -0.35
VPS13CQ709C8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13CQ709C8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13CQ709C8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 REXO1L5P-201ENST00000622260 2098 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 AC012362.1-201ENST00000434906 739 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 RPL17P45-201ENST00000586289 509 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ENPP7P14-201ENST00000621765 1040 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 AC084018.2-201ENST00000613093 2607 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 AC092127.1-201ENST00000567093 3455 ntBASIC12.85□□□□□ -0.35
VPS13CQ709C8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13CQ709C8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13CQ709C8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
VPS13CQ709C8 AC234644.1-201ENST00000406065 370 ntBASIC12.84□□□□□ -0.35
VPS13CQ709C8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13CQ709C8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13CQ709C8 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.84□□□□□ -0.35
VPS13CQ709C8 HLA-C-210ENST00000640219 976 ntBASIC12.84□□□□□ -0.35
VPS13CQ709C8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13CQ709C8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VPS13CQ709C8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms