Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 AL080243.2-201ENST00000418783 582 ntBASIC17.77■□□□□ 0.44
SHC4Q6S5L8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC4Q6S5L8 AC084364.1-201ENST00000551967 1556 ntBASIC17.77■□□□□ 0.44
SHC4Q6S5L8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SHC4Q6S5L8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AL512356.2-201ENST00000546955 174 ntBASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC4Q6S5L8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC4Q6S5L8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC4Q6S5L8 AC106881.1-201ENST00000605849 3329 ntBASIC17.75■□□□□ 0.43
SHC4Q6S5L8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms