Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AC016694.1-201ENST00000434179 700 ntBASIC18.73■□□□□ 0.59
PDS5AQ29RF7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AC007551.1-201ENST00000457394 519 ntBASIC18.73■□□□□ 0.59
PDS5AQ29RF7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 KRT18P25-201ENST00000508931 1278 ntBASIC18.73■□□□□ 0.59
PDS5AQ29RF7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AC025279.2-201ENST00000569730 653 ntBASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 AL391005.1-201ENST00000623953 2435 ntBASIC18.72■□□□□ 0.59
PDS5AQ29RF7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 AC026691.1-201ENST00000602502 2017 ntBASIC18.72■□□□□ 0.59
PDS5AQ29RF7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 AC010491.1-201ENST00000563101 2797 ntBASIC18.72■□□□□ 0.59
PDS5AQ29RF7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 CNN2P8-201ENST00000421872 913 ntBASIC18.72■□□□□ 0.59
PDS5AQ29RF7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.72■□□□□ 0.59
PDS5AQ29RF7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 AL138709.1-201ENST00000614840 1693 ntBASIC18.71■□□□□ 0.59
PDS5AQ29RF7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 AC099336.1-201ENST00000417053 1171 ntBASIC18.71■□□□□ 0.59
PDS5AQ29RF7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDS5AQ29RF7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDS5AQ29RF7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms