Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH1Q08174 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH1Q08174 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH1Q08174 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 AC013268.4-201ENST00000637413 2228 ntBASIC15.24■□□□□ 0.03
PCDH1Q08174 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 CETN4P-206ENST00000642099 2168 ntBASIC15.24■□□□□ 0.03
PCDH1Q08174 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PCDH1Q08174 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PCDH1Q08174 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH1Q08174 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH1Q08174 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PCDH1Q08174 AC109322.1-201ENST00000524499 1264 ntBASIC15.24■□□□□ 0.03
PCDH1Q08174 AC023824.1-201ENST00000562945 2975 ntBASIC15.24■□□□□ 0.03
PCDH1Q08174 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH1Q08174 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PCDH1Q08174 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH1Q08174 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC092127.1-201ENST00000567093 3455 ntBASIC15.23■□□□□ 0.03
PCDH1Q08174 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDH1Q08174 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDH1Q08174 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH1Q08174 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 TARDBPP1-201ENST00000442013 1203 ntBASIC15.23■□□□□ 0.03
PCDH1Q08174 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH1Q08174 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH1Q08174 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH1Q08174 MIR6069-201ENST00000620069 79 ntBASIC15.23■□□□□ 0.03
PCDH1Q08174 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 AC112693.3-201ENST00000624819 1983 ntBASIC15.23■□□□□ 0.03
PCDH1Q08174 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH1Q08174 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDH1Q08174 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PCDH1Q08174 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH1Q08174 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH1Q08174 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDH1Q08174 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH1Q08174 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH1Q08174 RPL37AP1-201ENST00000412502 279 ntBASIC15.22■□□□□ 0.03
PCDH1Q08174 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms