Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 AC093724.1-201ENST00000448659 1027 ntBASIC12.18□□□□□ -0.46
HIST1H1AQ02539 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.18□□□□□ -0.46
HIST1H1AQ02539 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 HAUS4P1-201ENST00000406739 1145 ntBASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AC140658.5-201ENST00000438532 169 ntBASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 KRT19P2-202ENST00000557173 1012 ntBASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.17□□□□□ -0.46
HIST1H1AQ02539 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H1AQ02539 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 PMS2P7-201ENST00000506558 1336 ntBASIC12.16□□□□□ -0.46
HIST1H1AQ02539 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms