Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CL1P78423 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 AL161772.1-201ENST00000610494 4412 ntBASIC12.8□□□□□ -0.36
CX3CL1P78423 AC112504.1-201ENST00000623415 1841 ntBASIC12.8□□□□□ -0.36
CX3CL1P78423 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CL1P78423 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.8□□□□□ -0.36
CX3CL1P78423 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CX3CL1P78423 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.8□□□□□ -0.36
CX3CL1P78423 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CX3CL1P78423 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CX3CL1P78423 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.79□□□□□ -0.36
CX3CL1P78423 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 AL353705.2-201ENST00000428243 662 ntBASIC12.79□□□□□ -0.36
CX3CL1P78423 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.79□□□□□ -0.36
CX3CL1P78423 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.79□□□□□ -0.36
CX3CL1P78423 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CX3CL1P78423 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.79□□□□□ -0.36
CX3CL1P78423 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 AC027612.4-201ENST00000605371 583 ntBASIC12.79□□□□□ -0.36
CX3CL1P78423 AC026979.3-201ENST00000607315 403 ntBASIC12.79□□□□□ -0.36
CX3CL1P78423 AC139530.3-201ENST00000620344 690 ntBASIC12.79□□□□□ -0.36
CX3CL1P78423 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CL1P78423 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CL1P78423 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 AL691432.1-201ENST00000596308 1422 ntBASIC12.79□□□□□ -0.36
CX3CL1P78423 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CL1P78423 AP003680.1-201ENST00000598970 3660 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 AP005117.1-202ENST00000581724 1908 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 TCAF2P1-201ENST00000291129 2421 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CX3CL1P78423 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CL1P78423 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CX3CL1P78423 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CL1P78423 SPDYE14P-201ENST00000442619 822 ntBASIC12.78□□□□□ -0.36
CX3CL1P78423 AL139010.1-201ENST00000454878 894 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms