Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.99■□□□□ 0.15
PRAMEP78395 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.99■□□□□ 0.15
PRAMEP78395 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.99■□□□□ 0.15
PRAMEP78395 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.99■□□□□ 0.15
PRAMEP78395 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.99■□□□□ 0.15
PRAMEP78395 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.99■□□□□ 0.15
PRAMEP78395 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 CNN2P11-201ENST00000429351 262 ntBASIC15.98■□□□□ 0.15
PRAMEP78395 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEP78395 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEP78395 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEP78395 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 SNHG9-202ENST00000564014 471 ntBASIC15.98■□□□□ 0.15
PRAMEP78395 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEP78395 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 AL450472.2-201ENST00000603663 1156 ntBASIC15.98■□□□□ 0.15
PRAMEP78395 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.98■□□□□ 0.15
PRAMEP78395 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 AC126177.1-201ENST00000547829 2218 ntBASIC15.98■□□□□ 0.15
PRAMEP78395 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEP78395 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEP78395 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEP78395 AC007326.2-201ENST00000624224 7579 ntBASIC15.98■□□□□ 0.15
PRAMEP78395 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.97■□□□□ 0.15
PRAMEP78395 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PRAMEP78395 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PRAMEP78395 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PRAMEP78395 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.97■□□□□ 0.15
PRAMEP78395 GPS2P2-201ENST00000430745 888 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 SPDYE14P-201ENST00000442619 822 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 AP006288.1-201ENST00000446065 395 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 AC026150.2-201ENST00000564693 1156 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 AC105021.1-202ENST00000570572 669 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.97■□□□□ 0.15
PRAMEP78395 AC134684.3-201ENST00000641758 218 ntBASIC15.97■□□□□ 0.15
PRAMEP78395 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms