Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.57□□□□□ -0.56
APOC4P55056 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.57□□□□□ -0.56
APOC4P55056 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOC4P55056 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
APOC4P55056 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
APOC4P55056 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 DGCR5-201ENST00000399539 862 ntBASIC11.56□□□□□ -0.56
APOC4P55056 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
APOC4P55056 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.56□□□□□ -0.56
APOC4P55056 TOMM22P5-201ENST00000416399 439 ntBASIC11.56□□□□□ -0.56
APOC4P55056 COX5BP8-201ENST00000416911 349 ntBASIC11.56□□□□□ -0.56
APOC4P55056 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 AL589987.1-201ENST00000453380 819 ntBASIC11.56□□□□□ -0.56
APOC4P55056 RN7SL399P-201ENST00000471648 279 ntBASIC11.56□□□□□ -0.56
APOC4P55056 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.56□□□□□ -0.56
APOC4P55056 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.56□□□□□ -0.56
APOC4P55056 HNRNPUP1-201ENST00000554987 333 ntBASIC11.56□□□□□ -0.56
APOC4P55056 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.56□□□□□ -0.56
APOC4P55056 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.56□□□□□ -0.56
APOC4P55056 CHCHD2P3-201ENST00000603038 451 ntBASIC11.56□□□□□ -0.56
APOC4P55056 TMEM261P1-201ENST00000604899 340 ntBASIC11.56□□□□□ -0.56
APOC4P55056 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOC4P55056 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
APOC4P55056 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOC4P55056 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 MYO15B-237ENST00000642007 4893 ntBASIC11.55□□□□□ -0.56
APOC4P55056 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms