Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP11P51784 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.76■□□□□ 0.43
USP11P51784 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP11P51784 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.76■□□□□ 0.43
USP11P51784 FAM86LP-201ENST00000478302 853 ntBASIC17.76■□□□□ 0.43
USP11P51784 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.76■□□□□ 0.43
USP11P51784 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.76■□□□□ 0.43
USP11P51784 AC140912.1-201ENST00000577171 1054 ntBASIC17.76■□□□□ 0.43
USP11P51784 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.76■□□□□ 0.43
USP11P51784 TMEM261P1-201ENST00000604899 340 ntBASIC17.76■□□□□ 0.43
USP11P51784 MIR8072-201ENST00000614241 80 ntBASIC17.76■□□□□ 0.43
USP11P51784 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.76■□□□□ 0.43
USP11P51784 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.76■□□□□ 0.43
USP11P51784 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.76■□□□□ 0.43
USP11P51784 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP11P51784 PAUPAR-201ENST00000630360 2965 ntBASIC17.76■□□□□ 0.43
USP11P51784 AC020658.6-201ENST00000623564 1870 ntBASIC17.75■□□□□ 0.43
USP11P51784 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
USP11P51784 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
USP11P51784 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.75■□□□□ 0.43
USP11P51784 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.75■□□□□ 0.43
USP11P51784 AC104596.2-201ENST00000512793 793 ntBASIC17.75■□□□□ 0.43
USP11P51784 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.75■□□□□ 0.43
USP11P51784 AC123567.1-201ENST00000548294 1261 ntBASIC17.75■□□□□ 0.43
USP11P51784 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 AC027307.3-201ENST00000594262 1100 ntBASIC17.75■□□□□ 0.43
USP11P51784 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.75■□□□□ 0.43
USP11P51784 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
USP11P51784 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.75■□□□□ 0.43
USP11P51784 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP11P51784 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP11P51784 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 AC090616.6-203ENST00000579186 1945 ntBASIC17.74■□□□□ 0.43
USP11P51784 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 AC092850.2-201ENST00000623821 2697 ntBASIC17.74■□□□□ 0.43
USP11P51784 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
USP11P51784 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 MYCLP2-201ENST00000449268 967 ntBASIC17.74■□□□□ 0.43
USP11P51784 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP11P51784 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.74■□□□□ 0.43
USP11P51784 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.74■□□□□ 0.43
USP11P51784 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
USP11P51784 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms