Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.02■□□□□ -0
RORAP35398 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.02■□□□□ -0
RORAP35398 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.02■□□□□ -0
RORAP35398 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.02■□□□□ -0
RORAP35398 AC132938.2-201ENST00000579188 680 ntBASIC15.02■□□□□ -0
RORAP35398 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.02■□□□□ -0
RORAP35398 AL158212.4-201ENST00000624062 1286 ntBASIC15.02■□□□□ -0
RORAP35398 AL591163.1-201ENST00000641757 987 ntBASIC15.02■□□□□ -0
RORAP35398 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RORAP35398 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RORAP35398 PCDHA1-201ENST00000378133 2726 ntBASIC15.02□□□□□ -0.01
RORAP35398 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.02□□□□□ -0.01
RORAP35398 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.02□□□□□ -0.01
RORAP35398 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.02□□□□□ -0.01
RORAP35398 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RORAP35398 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.02□□□□□ -0.01
RORAP35398 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RORAP35398 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RORAP35398 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RORAP35398 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RORAP35398 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RORAP35398 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RORAP35398 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.01□□□□□ -0.01
RORAP35398 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.01□□□□□ -0.01
RORAP35398 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RORAP35398 MIR8072-201ENST00000614241 80 ntBASIC15.01□□□□□ -0.01
RORAP35398 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.01□□□□□ -0.01
RORAP35398 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 AC092850.2-201ENST00000623821 2697 ntBASIC15.01□□□□□ -0.01
RORAP35398 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.01□□□□□ -0.01
RORAP35398 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RORAP35398 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RORAP35398 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RORAP35398 AL513523.2-202ENST00000427283 2040 ntBASIC15□□□□□ -0.01
RORAP35398 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RORAP35398 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms