Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC21.79■■□□□ 1.08
CPS1P31327 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CPS1P31327 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 AL157791.1-201ENST00000553667 1699 ntBASIC21.78■■□□□ 1.08
CPS1P31327 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.78■■□□□ 1.08
CPS1P31327 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
CPS1P31327 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 MTHFR-217ENST00000641820 1569 ntBASIC21.78■■□□□ 1.08
CPS1P31327 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CPS1P31327 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.78■■□□□ 1.08
CPS1P31327 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.78■■□□□ 1.08
CPS1P31327 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.78■■□□□ 1.08
CPS1P31327 PRSS30P-206ENST00000641773 873 ntBASIC21.78■■□□□ 1.08
CPS1P31327 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 ANKRD30BP2-201ENST00000435744 1610 ntBASIC21.78■■□□□ 1.08
CPS1P31327 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CPS1P31327 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPS1P31327 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPS1P31327 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CPS1P31327 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.77■■□□□ 1.08
CPS1P31327 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC21.77■■□□□ 1.08
CPS1P31327 FAU-202ENST00000434372 533 ntTSL 2 BASIC21.77■■□□□ 1.08
CPS1P31327 CHMP1AP1-201ENST00000445563 662 ntBASIC21.77■■□□□ 1.08
CPS1P31327 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CPS1P31327 AC100850.1-201ENST00000506768 649 ntBASIC21.77■■□□□ 1.08
CPS1P31327 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.77■■□□□ 1.08
CPS1P31327 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPS1P31327 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CPS1P31327 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPS1P31327 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CPS1P31327 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
CPS1P31327 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CPS1P31327 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.76■■□□□ 1.07
CPS1P31327 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.76■■□□□ 1.07
CPS1P31327 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.76■■□□□ 1.07
CPS1P31327 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 AC068587.8-201ENST00000641239 219 ntBASIC21.76■■□□□ 1.07
CPS1P31327 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CPS1P31327 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CPS1P31327 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CPS1P31327 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPS1P31327 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CPS1P31327 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.75■■□□□ 1.07
CPS1P31327 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 AC114812.1-204ENST00000449669 728 ntBASIC21.75■■□□□ 1.07
CPS1P31327 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 AC021723.1-201ENST00000486306 515 ntBASIC21.75■■□□□ 1.07
CPS1P31327 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.75■■□□□ 1.07
CPS1P31327 MIR4313-201ENST00000580760 101 ntBASIC21.75■■□□□ 1.07
CPS1P31327 AC242376.2-201ENST00000619355 883 ntBASIC21.75■■□□□ 1.07
CPS1P31327 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.75■■□□□ 1.07
CPS1P31327 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 AC148477.4-201ENST00000613430 1793 ntBASIC21.75■■□□□ 1.07
CPS1P31327 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.75■■□□□ 1.07
CPS1P31327 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CPS1P31327 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPS1P31327 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.75■■□□□ 1.07
CPS1P31327 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPS1P31327 RPL7P35-201ENST00000446943 740 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms