Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 AC074044.1-201ENST00000609673 707 ntBASIC16.24■□□□□ 0.19
ERCC2P18074 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ERCC2P18074 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.24■□□□□ 0.19
ERCC2P18074 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 AC073347.1-201ENST00000421633 2643 ntBASIC16.24■□□□□ 0.19
ERCC2P18074 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.24■□□□□ 0.19
ERCC2P18074 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 AC092384.3-202ENST00000564646 2873 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ERCC2P18074 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.23■□□□□ 0.19
ERCC2P18074 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.23■□□□□ 0.19
ERCC2P18074 KRT18P64-201ENST00000434946 1219 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.23■□□□□ 0.19
ERCC2P18074 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 AC009477.1-201ENST00000452936 217 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 AC004890.2-204ENST00000481968 304 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.23■□□□□ 0.19
ERCC2P18074 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 AC009407.1-201ENST00000568958 598 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 LINC01115-203ENST00000606068 577 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 AF228730.6-201ENST00000641497 218 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 AC084121.3-201ENST00000641716 218 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 PPT1-215ENST00000641471 2368 ntBASIC16.23■□□□□ 0.19
ERCC2P18074 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ERCC2P18074 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC2P18074 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
ERCC2P18074 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC2P18074 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
ERCC2P18074 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms