Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.59□□□□□ -0.07
BMP4P12644 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 FAM185BP-201ENST00000443595 716 ntBASIC14.59□□□□□ -0.07
BMP4P12644 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 AL513480.1-201ENST00000451731 511 ntBASIC14.59□□□□□ -0.07
BMP4P12644 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.59□□□□□ -0.07
BMP4P12644 AC112191.1-201ENST00000523689 701 ntBASIC14.59□□□□□ -0.07
BMP4P12644 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.59□□□□□ -0.07
BMP4P12644 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.59□□□□□ -0.07
BMP4P12644 AC013467.2-201ENST00000605472 835 ntBASIC14.59□□□□□ -0.07
BMP4P12644 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.59□□□□□ -0.07
BMP4P12644 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
BMP4P12644 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BMP4P12644 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.59□□□□□ -0.07
BMP4P12644 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
BMP4P12644 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BMP4P12644 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
BMP4P12644 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 IGLL3P-201ENST00000412472 434 ntBASIC14.58□□□□□ -0.08
BMP4P12644 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.58□□□□□ -0.08
BMP4P12644 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.58□□□□□ -0.08
BMP4P12644 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.58□□□□□ -0.08
BMP4P12644 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.58□□□□□ -0.08
BMP4P12644 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BMP4P12644 AL021920.2-201ENST00000624828 1351 ntBASIC14.58□□□□□ -0.08
BMP4P12644 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
BMP4P12644 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
BMP4P12644 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BMP4P12644 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.57□□□□□ -0.08
BMP4P12644 AC010327.5-201ENST00000586923 3061 ntBASIC14.57□□□□□ -0.08
BMP4P12644 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.57□□□□□ -0.08
BMP4P12644 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.57□□□□□ -0.08
BMP4P12644 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BMP4P12644 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.57□□□□□ -0.08
BMP4P12644 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BMP4P12644 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
BMP4P12644 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.57□□□□□ -0.08
BMP4P12644 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
BMP4P12644 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.57□□□□□ -0.08
BMP4P12644 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BMP4P12644 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms