Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
TPM3P06753 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM3P06753 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 TSPY19P-201ENST00000418461 509 ntBASIC17.78■□□□□ 0.44
TPM3P06753 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.78■□□□□ 0.44
TPM3P06753 TSPY18P-201ENST00000441642 509 ntBASIC17.78■□□□□ 0.44
TPM3P06753 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 KRT18P34-201ENST00000488218 1270 ntBASIC17.78■□□□□ 0.44
TPM3P06753 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM3P06753 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM3P06753 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM3P06753 AL356488.2-201ENST00000602755 427 ntBASIC17.78■□□□□ 0.44
TPM3P06753 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM3P06753 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM3P06753 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM3P06753 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TPM3P06753 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM3P06753 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TPM3P06753 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TPM3P06753 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TPM3P06753 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM3P06753 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.77■□□□□ 0.44
TPM3P06753 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM3P06753 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.77■□□□□ 0.44
TPM3P06753 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM3P06753 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM3P06753 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TPM3P06753 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPM3P06753 AC007686.3-201ENST00000619017 3487 ntBASIC17.77■□□□□ 0.43
TPM3P06753 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM3P06753 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM3P06753 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TPM3P06753 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
TPM3P06753 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.76■□□□□ 0.43
TPM3P06753 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.76■□□□□ 0.43
TPM3P06753 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPM3P06753 RPS2P1-201ENST00000434010 821 ntBASIC17.76■□□□□ 0.43
TPM3P06753 FAM210CP-201ENST00000445714 574 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms