Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CHGBP05060 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.87■□□□□ 0.61
CHGBP05060 MYCLP2-201ENST00000449268 967 ntBASIC18.87■□□□□ 0.61
CHGBP05060 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.87■□□□□ 0.61
CHGBP05060 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CHGBP05060 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.87■□□□□ 0.61
CHGBP05060 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.87■□□□□ 0.61
CHGBP05060 RPSAP52-203ENST00000622976 1023 ntBASIC18.87■□□□□ 0.61
CHGBP05060 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.87■□□□□ 0.61
CHGBP05060 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CHGBP05060 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHGBP05060 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.86■□□□□ 0.61
CHGBP05060 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.86■□□□□ 0.61
CHGBP05060 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.86■□□□□ 0.61
CHGBP05060 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 AL596325.1-201ENST00000563991 1082 ntBASIC18.86■□□□□ 0.61
CHGBP05060 AC140912.1-201ENST00000577171 1054 ntBASIC18.86■□□□□ 0.61
CHGBP05060 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.86■□□□□ 0.61
CHGBP05060 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHGBP05060 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHGBP05060 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHGBP05060 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHGBP05060 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHGBP05060 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.85■□□□□ 0.61
CHGBP05060 FAM86LP-201ENST00000478302 853 ntBASIC18.85■□□□□ 0.61
CHGBP05060 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.85■□□□□ 0.61
CHGBP05060 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.85■□□□□ 0.61
CHGBP05060 WFDC1-204ENST00000613603 549 ntBASIC18.85■□□□□ 0.61
CHGBP05060 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.85■□□□□ 0.61
CHGBP05060 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.85■□□□□ 0.61
CHGBP05060 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
CHGBP05060 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 AC144831.1-201ENST00000573312 2656 ntBASIC18.85■□□□□ 0.61
CHGBP05060 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms