Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 AC092127.1-201ENST00000567093 3455 ntBASIC14.26□□□□□ -0.13
HLA-DQA2P01906 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQA2P01906 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AC020658.6-201ENST00000623564 1870 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AL355306.1-201ENST00000415580 579 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 RN7SL589P-201ENST00000481268 310 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 IGHV3-62-201ENST00000520057 340 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AC073389.1-201ENST00000595595 795 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 AC008267.7-201ENST00000624570 1194 ntBASIC14.25□□□□□ -0.13
HLA-DQA2P01906 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQA2P01906 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 SPDYE11-202ENST00000450699 704 ntBASIC14.24□□□□□ -0.13
HLA-DQA2P01906 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 SPDYE9P-201ENST00000570642 692 ntBASIC14.24□□□□□ -0.13
HLA-DQA2P01906 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQA2P01906 SPDYE10P-202ENST00000612005 668 ntBASIC14.24□□□□□ -0.13
HLA-DQA2P01906 SPDYE8P-202ENST00000612377 668 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms