Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC012044.1-201ENST00000603431 297 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 AC025181.2-201ENST00000606994 802 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 AL353770.1-201ENST00000614915 403 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFBP01127 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PDGFBP01127 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
PDGFBP01127 AP001282.1-201ENST00000531301 1499 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PDGFBP01127 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFBP01127 RPSAP31-201ENST00000416648 895 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFBP01127 AC104073.2-201ENST00000453737 312 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFBP01127 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 AC019193.1-201ENST00000506678 823 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 AC116345.2-201ENST00000512837 523 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFBP01127 AP003171.2-201ENST00000528208 925 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 RN7SL713P-201ENST00000582127 302 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFBP01127 MIR6756-201ENST00000616240 63 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFBP01127 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 AL805961.1-203ENST00000641078 1258 ntBASIC15.65■□□□□ 0.1
PDGFBP01127 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFBP01127 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDGFBP01127 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFBP01127 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFBP01127 AC141586.5-201ENST00000624546 2050 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 AC106820.2-201ENST00000563775 3264 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFBP01127 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PDGFBP01127 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PDGFBP01127 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 AC114812.1-204ENST00000449669 728 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFBP01127 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.64■□□□□ 0.09
PDGFBP01127 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.64■□□□□ 0.09
PDGFBP01127 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFBP01127 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.64■□□□□ 0.09
PDGFBP01127 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFBP01127 AC087045.2-201ENST00000606279 1003 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 AP001065.2-201ENST00000617205 644 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 AL805961.1-201ENST00000642026 753 ntBASIC15.64■□□□□ 0.09
PDGFBP01127 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms