Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 HLA-H-201ENST00000383620 1096 ntBASIC14.45□□□□□ -0.1
RNF13O43567 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF13O43567 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.45□□□□□ -0.1
RNF13O43567 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.45□□□□□ -0.1
RNF13O43567 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF13O43567 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF13O43567 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF13O43567 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.45□□□□□ -0.1
RNF13O43567 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF13O43567 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 AC138035.3-201ENST00000622706 2791 ntBASIC14.45□□□□□ -0.1
RNF13O43567 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF13O43567 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNF13O43567 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF13O43567 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 MIR346-201ENST00000362234 95 ntBASIC14.44□□□□□ -0.1
RNF13O43567 FAM220BP-201ENST00000377689 816 ntBASIC14.44□□□□□ -0.1
RNF13O43567 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 AP000347.1-202ENST00000435868 847 ntBASIC14.44□□□□□ -0.1
RNF13O43567 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF13O43567 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF13O43567 LINC01225-203ENST00000563550 1244 ntBASIC14.44□□□□□ -0.1
RNF13O43567 MIR3687-2-201ENST00000577708 61 ntBASIC14.44□□□□□ -0.1
RNF13O43567 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF13O43567 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 MIR3687-1-201ENST00000614492 61 ntBASIC14.44□□□□□ -0.1
RNF13O43567 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF13O43567 AL009178.2-201ENST00000597278 2719 ntBASIC14.44□□□□□ -0.1
RNF13O43567 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 AC087481.3-201ENST00000602886 1894 ntBASIC14.44□□□□□ -0.1
RNF13O43567 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 AL365209.1-201ENST00000624418 6473 ntBASIC14.44□□□□□ -0.1
RNF13O43567 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF13O43567 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF13O43567 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RNF13O43567 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF13O43567 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF13O43567 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RNF13O43567 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RNF13O43567 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms