Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 AL138709.1-201ENST00000614840 1693 ntBASIC20.04■□□□□ 0.8
KCNQ3O43525 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNQ3O43525 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KCNQ3O43525 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.04■□□□□ 0.8
KCNQ3O43525 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.04■□□□□ 0.8
KCNQ3O43525 AC025279.2-201ENST00000569730 653 ntBASIC20.04■□□□□ 0.8
KCNQ3O43525 AC145423.3-201ENST00000615987 467 ntBASIC20.04■□□□□ 0.8
KCNQ3O43525 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNQ3O43525 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
KCNQ3O43525 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KCNQ3O43525 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNQ3O43525 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KCNQ3O43525 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNQ3O43525 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNQ3O43525 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 CNN2P8-201ENST00000421872 913 ntBASIC20.03■□□□□ 0.8
KCNQ3O43525 FAM197Y7-201ENST00000432892 766 ntBASIC20.03■□□□□ 0.8
KCNQ3O43525 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNQ3O43525 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KCNQ3O43525 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNQ3O43525 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNQ3O43525 AC009542.2-202ENST00000619004 1067 ntBASIC20.03■□□□□ 0.8
KCNQ3O43525 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNQ3O43525 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNQ3O43525 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNQ3O43525 CICP13-201ENST00000422015 2789 ntBASIC20.03■□□□□ 0.8
KCNQ3O43525 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KCNQ3O43525 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNQ3O43525 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KCNQ3O43525 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
KCNQ3O43525 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KCNQ3O43525 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KCNQ3O43525 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 RNU1-114P-201ENST00000365297 166 ntBASIC20.02■□□□□ 0.8
KCNQ3O43525 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KCNQ3O43525 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 RNA5SP412-201ENST00000516234 123 ntBASIC20.02■□□□□ 0.8
KCNQ3O43525 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 AC078819.1-201ENST00000547454 765 ntBASIC20.02■□□□□ 0.8
KCNQ3O43525 AC012085.1-201ENST00000548270 765 ntBASIC20.02■□□□□ 0.8
KCNQ3O43525 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNQ3O43525 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.02■□□□□ 0.8
KCNQ3O43525 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNQ3O43525 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNQ3O43525 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.02■□□□□ 0.8
KCNQ3O43525 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNQ3O43525 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNQ3O43525 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
KCNQ3O43525 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNQ3O43525 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNQ3O43525 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNQ3O43525 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.02■□□□□ 0.79
KCNQ3O43525 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNQ3O43525 AC127383.1-201ENST00000444697 1800 ntBASIC20.02■□□□□ 0.79
KCNQ3O43525 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.01■□□□□ 0.79
KCNQ3O43525 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.01■□□□□ 0.79
KCNQ3O43525 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 AC148477.4-201ENST00000613430 1793 ntBASIC20.01■□□□□ 0.79
KCNQ3O43525 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms