Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSI1O43347 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.38■□□□□ 0.21
MSI1O43347 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MSI1O43347 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 CLK3P2-201ENST00000427566 1453 ntBASIC16.37■□□□□ 0.21
MSI1O43347 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 AC068418.2-201ENST00000577309 3703 ntBASIC16.37■□□□□ 0.21
MSI1O43347 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
MSI1O43347 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 AC098850.1-201ENST00000419919 790 ntBASIC16.37■□□□□ 0.21
MSI1O43347 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.37■□□□□ 0.21
MSI1O43347 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.37■□□□□ 0.21
MSI1O43347 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 AL353779.1-201ENST00000434793 351 ntBASIC16.37■□□□□ 0.21
MSI1O43347 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.37■□□□□ 0.21
MSI1O43347 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
MSI1O43347 AC140912.1-201ENST00000577171 1054 ntBASIC16.37■□□□□ 0.21
MSI1O43347 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
MSI1O43347 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MSI1O43347 AC105233.6-201ENST00000642093 218 ntBASIC16.37■□□□□ 0.21
MSI1O43347 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.37■□□□□ 0.21
MSI1O43347 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MSI1O43347 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.37■□□□□ 0.21
MSI1O43347 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.37■□□□□ 0.21
MSI1O43347 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
MSI1O43347 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSI1O43347 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.36■□□□□ 0.21
MSI1O43347 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.36■□□□□ 0.21
MSI1O43347 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.36■□□□□ 0.21
MSI1O43347 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
MSI1O43347 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.36■□□□□ 0.21
MSI1O43347 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 MIR8072-201ENST00000614241 80 ntBASIC16.36■□□□□ 0.21
MSI1O43347 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.36■□□□□ 0.21
MSI1O43347 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
MSI1O43347 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.36■□□□□ 0.21
MSI1O43347 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSI1O43347 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.35■□□□□ 0.21
MSI1O43347 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.35■□□□□ 0.21
MSI1O43347 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.35■□□□□ 0.21
MSI1O43347 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 AC123567.1-201ENST00000548294 1261 ntBASIC16.35■□□□□ 0.21
MSI1O43347 RARRES2P5-201ENST00000564013 466 ntBASIC16.35■□□□□ 0.21
MSI1O43347 TP53TG3HP-202ENST00000569755 579 ntBASIC16.35■□□□□ 0.21
MSI1O43347 AC025048.6-201ENST00000634326 1161 ntBASIC16.35■□□□□ 0.21
MSI1O43347 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 AC009090.5-201ENST00000624886 2285 ntBASIC16.35■□□□□ 0.21
MSI1O43347 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms