Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC006504.4-201ENST00000592118 1568 ntBASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 WASH6P-202ENST00000359512 1437 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 GRK6P1-201ENST00000400595 1711 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AC007686.3-201ENST00000619017 3487 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SCARNA2-201ENST00000458748 420 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 MIR4515-201ENST00000584082 81 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 MIR193BHG-211ENST00000641433 5365 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AGAP7P-201ENST00000582299 2062 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AGAP14-201ENST00000624701 2060 ntBASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP3Q9Y2W7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC126365.1-201ENST00000578585 1514 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AL031595.1-201ENST00000623969 4709 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms