Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIP2Q9UDT6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIP2Q9UDT6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 KRT8P37-201ENST00000451609 1420 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AL353779.1-201ENST00000434793 351 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AL589987.1-201ENST00000453380 819 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AC005225.4-201ENST00000557330 545 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AC025048.3-201ENST00000590609 569 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AC027307.3-201ENST00000594262 1100 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 AC005702.4-201ENST00000618393 416 ntBASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIP2Q9UDT6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 AZGP1P1-201ENST00000411909 902 ntBASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIP2Q9UDT6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC010491.1-201ENST00000563101 2797 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC005034.1-201ENST00000426657 489 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 TP53TG3HP-202ENST00000569755 579 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC239800.4-201ENST00000603712 296 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC012645.4-201ENST00000610691 1061 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.74■□□□□ 0.59
CLIP2Q9UDT6 AL035252.4-201ENST00000624174 288 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms