Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AC055876.3-201ENST00000431496 288 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 CYMP-203ENST00000474680 1263 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 RNA5SP421-201ENST00000516864 134 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 DUX4L27-201ENST00000554796 1261 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AC027796.2-201ENST00000575326 344 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 AC138649.4-201ENST00000612222 287 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 KRT8P37-201ENST00000451609 1420 ntBASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PARPBPQ9NWS1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 BASP1P1-201ENST00000430708 665 ntBASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AL512638.1-201ENST00000457493 794 ntBASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC097493.3-201ENST00000509725 367 ntBASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 BNIP3P1-202ENST00000550043 1585 ntBASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PARPBPQ9NWS1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms