Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF3Q9HD45 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF3Q9HD45 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF3Q9HD45 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF3Q9HD45 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AZGP1P1-201ENST00000411909 902 ntBASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 POU5F1P6-201ENST00000466990 990 ntBASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC119751.2-201ENST00000504529 210 ntBASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 AC010319.3-201ENST00000597028 470 ntBASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 COX11-210ENST00000639671 696 ntBASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF3Q9HD45 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 EEF1DP4-201ENST00000446006 880 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 KRT223P-202ENST00000449164 1292 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CROCCP4-201ENST00000457096 498 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 SNX29P1-201ENST00000548357 1007 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC243562.2-201ENST00000561247 970 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AP005482.1-201ENST00000563722 1273 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC036164.1-201ENST00000570544 333 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AL391069.4-201ENST00000609583 481 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC133552.6-201ENST00000613406 534 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 MIR6775-201ENST00000617557 69 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 AC005052.1-201ENST00000625181 2492 ntBASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms