Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP29Q9HBJ7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 AC069120.2-201ENST00000524091 540 ntBASIC16.29■□□□□ 0.2
USP29Q9HBJ7 HNRNPUP1-201ENST00000554987 333 ntBASIC16.29■□□□□ 0.2
USP29Q9HBJ7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 AC006058.4-201ENST00000624016 1670 ntBASIC16.29■□□□□ 0.2
USP29Q9HBJ7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
USP29Q9HBJ7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AZGP1P1-201ENST00000411909 902 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 TSPY16P-201ENST00000449843 468 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AL512638.1-201ENST00000457493 794 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC105021.1-202ENST00000570572 669 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC018529.1-201ENST00000613063 361 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 MIR6080-201ENST00000617359 66 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 C18orf15-201ENST00000623680 2534 ntBASIC16.28■□□□□ 0.2
USP29Q9HBJ7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
USP29Q9HBJ7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms